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Gene rplF from Helicobacter pylori 26695: 50S ribosomal protein L6
Member of NCBI Protein Clusters PRK05498(See COMBREX Page ) (See NCBI page)
NCBI Entrez GeneID 898751
UniProtKB accession
RefSeq Protein accession NP_208096.1 (PROVISIONAL)
Gene Symbol(s)
  • symbol: rplF
  • locus tag: HP1304
Organism Helicobacter pylori 26695 (NCBI TaxID: 85962)
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Post a comment about this gene to appear on this page (info).
Source Predicted function(s)
NCBI Protein Cluster Prediction 50S ribosomal protein L6
Berkeley Phylogenomics Group GO:0005515 protein binding / (References: 19435885)
Berkeley Phylogenomics Group GO:0003735 structural constituent of ribosome / (References: 19435885)
Functional Status blueblue (function predicted, no experimental evidence)
Source of prediction NCBI Protein Clusters info
BLASTP hits to experimentally validated proteins
green rplF from Mycoplasma capricolum subsp. capricolum ATCC 27343
(%_identity=43.89; E_val=1e-36; BitScore=147.0)

other hits with E-value < 1e-05
Share the same Pfam domain composition with the following experimentally validated proteins
green rpl6p from Halobacterium sp. NRC-1

to see the rest 6 genes click here
GO terms
  • CC: GO:0030529 : ribonucleoprotein complex : IEA
  • CC: GO:0005622 : intracellular : IEA
  • BP: GO:0006412 : translation : IEA
  • MF: GO:0003723 : RNA binding : IEA
  • CC: GO:0005840 : ribosome : IEA
  • MF: GO:0003735 : structural constituent of ribosome : IEA
  • MF: GO:0019843 : rRNA binding : IEA
Domain Structure from CDD
See domain structure on NCBI Conserved Domain Database
Domain structure from Pfam
See domain structure on Pfam Database
The table at right lists genes that may be "functionally linked to" (i.e., participate in a common biological process, or form a protein complex with) the subject gene of this page, as determined by two sequence-independent methods, including phylogenetic profiling and operon membership (determined by OperonDB). (Info.) These linkages may also be viewed graphically using the program VisANT, by clicking on the headers of the table. Note: VisANT requires Java. To install the latest version of Java, see www.java.com
 OperonDB
gene neighbourhoods
rpsE30S ribosomal protein S5
 
 
rplR50S ribosomal protein L18
 
 
rpsN30S ribosomal protein S14
 
 
rpsH30S ribosomal protein S8