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Gene HP1262 from Helicobacter pylori 26695: NADH dehydrogenase subunit C
Member of NCBI Protein Clusters PRK08491(See COMBREX Page ) (See NCBI page)
NCBI Entrez GeneID 898780
UniProtKB accession
RefSeq Protein accession NP_208054.1 (PROVISIONAL)
Gene Symbol(s)
  • symbol: HP1262
  • locus tag: HP1262
Organism Helicobacter pylori 26695 (NCBI TaxID: 85962)
Other Cross References:
  • S
    Structure(s) available in PDB:
  • C
    Gene cloned by a participant in the Protein Structure Initiative (PSI): TargetDB. (To obtain a clone, please contact the PSI:Biology-Materials Repository.)
  • U
    Protein purified by a participant in the Protein Structure Initiative (PSI): TargetDB. (If you are interested in collaborating to obtain the protein, please contact the Northeast Structural Genomics consortium).
  • Protein described in EcoCyc:
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Contribute a predicted function for this gene (free text, GO terms, or EC number) (info). Be sure to check the list of current predicted functions in the section immediately below beforehand.
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Post a comment about this gene to appear on this page (info).
Source Predicted function(s)
NCBI Protein Cluster Prediction NADH dehydrogenase subunit C
Prof. Vitkup 1.6.99.5 / Confidence:0.283 (References: 19935659, 16507154)
Berkeley Phylogenomics Group GO:0005515 protein binding / (References: 19435885)
Berkeley Phylogenomics Group GO:0015453 oxidoreduction-driven active transmembrane transporter activity / (References: 19435885)
Functional Status blueblue (function predicted, no experimental evidence)
Source of prediction NCBI Protein Clusters info
EC number
BLASTP hits to experimentally validated proteins This gene does not have a BLAST match to any experimentally validated gene with an E value below 1e-5
Share the same Pfam domain composition with the following experimentally validated proteins
green nqo5 from Paracoccus denitrificans

to see the rest 3 genes click here
GO terms
  • MF: GO:0016651 : oxidoreductase activity, acting on NADH or NADPH : IEA
  • BP: GO:0055114 : oxidation reduction : IEA
  • MF: GO:0050136 : NADH dehydrogenase (quinone) activity : IEA
  • BP: GO:0006810 : transport : IEA
  • MF: GO:0008137 : NADH dehydrogenase (ubiquinone) activity : IEA
  • MF: GO:0016491 : oxidoreductase activity : IEA
  • MF: GO:0048038 : quinone binding : IEA
  • CC: GO:0016020 : membrane : IEA
Domain Structure from CDD
  • Complex1_30kDa: Respiratory-chain NADH dehydrogenase, 30 Kd subunit. NADH dehydrogenase subunit J; Provisional

See domain structure on NCBI Conserved Domain Database
Domain structure from Pfam
See domain structure on Pfam Database
The table at right lists genes that may be "functionally linked to" (i.e., participate in a common biological process, or form a protein complex with) the subject gene of this page, as determined by two sequence-independent methods, including phylogenetic profiling and operon membership (determined by OperonDB). (Info.) These linkages may also be viewed graphically using the program VisANT, by clicking on the headers of the table. Note: VisANT requires Java. To install the latest version of Java, see www.java.com
 OperonDB
gene neighbourhoods
phylogenetic profile
domain fusion
HP1260NADH dehydrogenase subunit A
 
 
 
 
HP1261NADH dehydrogenase subunit B
 
 
 
 
HP1263NADH dehydrogenase subunit D
 
 
 
 
HP1264hypothetical protein
 
   
HP1267NADH dehydrogenase subunit H  
 
 
HP1270NADH dehydrogenase subunit K  
 
 
HP1269NADH dehydrogenase subunit J  
 
 
HP1273NADH dehydrogenase subunit N  
 
 
HP1268NADH dehydrogenase subunit I  
 
 
Metabolic Annotation from Palsson Lab

Metabolic Reaction: NDH_1

Name
NADH dehydrogenase (menaquinone) (complex I)
Formula
3 h[c] + mqn6[c] + nadph[c] -> 2 h[e] + mql6[c] + nadp[c]
Pathway
Respiratory chain
Other Genes

Source: Ported to COMBREX by Segre's Lab
KEGG