Gene HP1339 from Helicobacter pylori 26695: biopolymer transport protein (exbB)
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Member of NCBI Protein Clusters
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CLSK496456(See COMBREX Page ) (See NCBI page)
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NCBI Entrez GeneID
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898784
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UniProtKB accession
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RefSeq Protein accession
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NP_208131.1 (PROVISIONAL)
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Gene Symbol(s)
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- symbol: HP1339
- locus tag: HP1339
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Organism
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Helicobacter pylori 26695 (NCBI TaxID: 85962)
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Initiate the grant application process for experimentally validating this gene (Important notice about COMBREX grants.)
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Contribute a predicted function for this gene (free text, GO terms, or EC number) (info). Be sure to
check the list of current predicted functions in the section immediately below beforehand.
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Nominate this gene for the Gold Standard Gene Database (if you believe it has been experimentally
validated) (info).
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Post a comment about this gene to appear on this page (info).
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Source
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Predicted function(s)
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NCBI Protein Cluster Prediction
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biopolymer transport protein
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Functional Status
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blue (function predicted, no experimental evidence)
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Source of prediction
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NCBI Protein Clusters info
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BLASTP hits to experimentally validated proteins
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This gene does not have a BLAST match to any experimentally validated gene with an E value below 1e-5
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Share the same Pfam domain composition with the following experimentally validated proteins
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to see the rest 5 genes click here
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GO terms
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CC:
GO:0016020 : membrane : IEA
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BP:
GO:0015031 : protein transport : IEA
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MF:
GO:0008565 : protein transporter activity : IEA
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BP:
GO:0006810 : transport : IEA
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CC:
GO:0005886 : plasma membrane : IEA
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CC:
GO:0016021 : integral to membrane : IEA
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Domain Structure from CDD
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- MotA_ExbB: MotA/TolQ/ExbB proton channel family. flagellar motor protein MotA; Provisional
See domain structure on NCBI Conserved Domain Database
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Domain structure from Pfam
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See domain structure on Pfam Database
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The table at right lists genes that may be "functionally linked to" (i.e., participate in a common biological process, or form a protein complex with) the subject gene of this page,
as determined by two sequence-independent methods, including phylogenetic profiling and operon membership (determined by OperonDB).
(Info.)
These linkages may also be viewed graphically using the program VisANT, by clicking on the headers of the table.
Note: VisANT requires Java. To install the latest version of Java, see www.java.com
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| | HP1340 | biopolymer transport protein (exbD) | | | | | HP0957 | 3-deoxy-D-manno-octulosonic-acid transferase | | | | | HP0003 | 2-dehydro-3-deoxyphosphooctonate aldolase | | | | | lpxC | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine d | | | | | HP1129 | biopolymer transport protein (exbD) | | | | | HP0605 | hypothetical protein | | | | | lpxD | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltra | | | | | HP0230 | 3-deoxy-manno-octulosonate cytidylyltransferase | | | | | lpxB | ipid-A-disaccharide synthase | | | | | lpxK | tetraacyldisaccharide 4'-kinase | | | | | HP1489 | lipase-like protein | | | | | HP1446 | biopolymer transport protein (exbD) | | | | | HP1375 | UDP-N-acetylglucosamine acyltransferase | | | |
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| Phenotype |
Description |
Expression
Class |
Reference(s) |
| Candidate essential gene |
Identified as essential gene in one or more studies (see references) |
Knock out |
(candidate essential)
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