Gene HP0005 from Helicobacter pylori 26695: OMP decarboxylase; OMPDCase; OMPdecase
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| Member of NCBI Protein Clusters | PRK00230(See COMBREX Page ) (See NCBI page) |
| NCBI Entrez GeneID | 898802 |
| UniProtKB accession | |
| RefSeq Protein accession | NP_206807.1 (PROVISIONAL) |
| Gene Symbol(s) |
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| Organism | Helicobacter pylori 26695 (NCBI TaxID: 85962) |
| Other Cross References: |
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| Source | Predicted function(s) |
| NCBI Protein Cluster Prediction | orotidine 5'-phosphate decarboxylase |
| Prof. Vitkup | 4.1.1.23 / Confidence:0.762 (References: 19935659, 16507154) |
| Berkeley Phylogenomics Group | GO:0000287 magnesium ion binding / (References: 19435885) |
| Berkeley Phylogenomics Group | GO:0004590 orotidine-5'-phosphate decarboxylase activity / (References: 19435885) |
| Berkeley Phylogenomics Group | GO:0033982 3-dehydro-L-gulonate-6-phosphate decarboxylase activity / (References: 19435885) |
| Berkeley Phylogenomics Group | 4.1.1.23: Orotidine-5'-phosphate decarboxylase. / (References: 19435885) |
| Berkeley Phylogenomics Group | GO:0004750 ribulose-phosphate 3-epimerase activity / (References: 19435885) |
| Berkeley Phylogenomics Group | GO:0004588 orotate phosphoribosyltransferase activity / (References: 19435885) |
| Berkeley Phylogenomics Group | 5.1.3.1: Ribulose-phosphate 3-epimerase. / (References: 19435885) |
| Berkeley Phylogenomics Group | GO:0005515 protein binding / (References: 19435885) |
| Functional Status |
blue (function predicted, no experimental evidence)
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| Source of prediction | NCBI Protein Clusters info | |
| EC number |
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| BLASTP hits to experimentally validated proteins |
other hits with E-value < 1e-05 |
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| Share the same Pfam domain composition with the following experimentally validated proteins |
to see the rest 105 genes click here |
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| GO terms |
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| Domain Structure from CDD |
See domain structure on NCBI Conserved Domain Database |
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| Domain structure from Pfam |
See domain structure on Pfam Database |
| The table at right lists genes that may be "functionally linked to" (i.e., participate in a common biological process, or form a protein complex with) the subject gene of this page, as determined by two sequence-independent methods, including phylogenetic profiling and operon membership (determined by OperonDB). (Info.) These linkages may also be viewed graphically using the program VisANT, by clicking on the headers of the table. Note: VisANT requires Java. To install the latest version of Java, see www.java.com |
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| Metabolic Annotation from Palsson Lab |
Metabolic Reaction: OMPDC
Source: Ported to COMBREX by Segre's Lab
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| KEGG |