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Gene HP0480 from Helicobacter pylori 26695: GTP-binding protein, fusA-homolog (yihK)
Member of NCBI Protein Clusters CLSK872368(See COMBREX Page ) (See NCBI page)
NCBI Entrez GeneID 898837
UniProtKB accession
RefSeq Protein accession NP_207278.1 (PROVISIONAL)
Gene Symbol(s)
  • symbol: HP0480
  • locus tag: HP0480
Organism Helicobacter pylori 26695 (NCBI TaxID: 85962)
Other Cross References:
  • S
    Structure(s) available in PDB:
  • C
    Gene cloned by a participant in the Protein Structure Initiative (PSI): TargetDB. (To obtain a clone, please contact the PSI:Biology-Materials Repository.)
  • U
    Protein purified by a participant in the Protein Structure Initiative (PSI): TargetDB. (If you are interested in collaborating to obtain the protein, please contact the Northeast Structural Genomics consortium).
  • Protein described in EcoCyc:
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Post a comment about this gene to appear on this page (info).
Source Predicted function(s)
NCBI Protein Cluster Prediction GTP-binding protein TypA
Prof. Vitkup 2.7.7.4 / Confidence:0.006 (References: 19935659, 16507154)
Berkeley Phylogenomics Group GO:0043022 ribosome binding / (References: 19435885)
Berkeley Phylogenomics Group GO:0003924 GTPase activity / (References: 19435885)
Berkeley Phylogenomics Group GO:0003746 translation elongation factor activity / (References: 19435885)
Berkeley Phylogenomics Group GO:0005515 protein binding / (References: 19435885)
Berkeley Phylogenomics Group GO:0005524 ATP binding / (References: 19435885)
Functional Status blueblue (function predicted, no experimental evidence)
Source of prediction NCBI Protein Clusters info
BLASTP hits to experimentally validated proteins This gene does not have a BLAST match to any experimentally validated gene with an E value below 1e-5
GO terms
  • MF: GO:0000166 : nucleotide binding : IEA
  • MF: GO:0003924 : GTPase activity : IEA
  • CC: GO:0005622 : intracellular : IEA
  • MF: GO:0005525 : GTP binding : IEA
Domain Structure from CDD
  • TypA_BipA: TypA (tyrosine phosphorylated protein A)/BipA subfamily. BipA is a protein belonging to the ribosome-binding family of .... (More)
  • BipA_TypA_C: BipA_TypA_C: a C-terminal portion of BipA or TypA having homology to the C terminal domains of the elongation factors EF.... (More)
  • BipA_TypA_II: BipA_TypA_II: domain II of BipA (also called TypA) having homology to domain II of the elongation factors (EFs) EF-G and.... (More)
  • TypA_BipA: GTP-binding protein TypA/BipA. This bacterial (and Arabidopsis) protein, termed TypA or BipA, a GTP-binding protein, is .... (More)

See domain structure on NCBI Conserved Domain Database
Domain structure from Pfam
See domain structure on Pfam Database
The table at right lists genes that may be "functionally linked to" (i.e., participate in a common biological process, or form a protein complex with) the subject gene of this page, as determined by two sequence-independent methods, including phylogenetic profiling and operon membership (determined by OperonDB). (Info.) These linkages may also be viewed graphically using the program VisANT, by clicking on the headers of the table. Note: VisANT requires Java. To install the latest version of Java, see www.java.com
 OperonDB
phylogenetic profile
HP0478adenine specific DNA methyltransferase (VSPIM)
 
 
HP0479hypothetical protein
 
 
HP0482hypothetical protein
 
 
HP0481adenine specific DNA methyltransferase (MFOKI)
 
 
HP1025putative heat shock protein (hspR) 
 
HP1393DNA repair protein (recN) 
 
HP0132L-serine deaminase (sdaA) 
 
HP1482exodeoxyribonuclease VII small subunit 
 
HP1541transcription-repair coupling factor (trcF) 
 
HP0597penicillin-binding protein 1A (PBP-1A) 
 
HP0683UDP-N-acetylglucosamine pyrophosphorylase (glmU) 
 
HP1149hypothetical protein 
 
HP1343hypothetical protein