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Gene rplV from Helicobacter pylori 26695: 50S ribosomal protein L22
Member of NCBI Protein Clusters PRK00565(See COMBREX Page ) (See NCBI page)
NCBI Entrez GeneID 898876
UniProtKB accession
RefSeq Protein accession NP_208106.1 (PROVISIONAL)
Gene Symbol(s)
  • symbol: rplV
  • locus tag: HP1314
Organism Helicobacter pylori 26695 (NCBI TaxID: 85962)
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Post a comment about this gene to appear on this page (info).
Source Predicted function(s)
NCBI Protein Cluster Prediction 50S ribosomal protein L22
Berkeley Phylogenomics Group GO:0005515 protein binding / (References: 19435885)
Berkeley Phylogenomics Group GO:0003735 structural constituent of ribosome / (References: 19435885)
Functional Status blueblue (function predicted, no experimental evidence)
Source of prediction NCBI Protein Clusters info
BLASTP hits to experimentally validated proteins
green rplV from Bacillus subtilis subsp. subtilis str. 168
(%_identity=42.73; E_val=3e-17; BitScore=81.6)

other hits with E-value < 1e-05
Share the same Pfam domain composition with the following experimentally validated proteins
green rplV from Bacillus subtilis subsp. subtilis str. 168

to see the rest 5 genes click here
GO terms
  • CC: GO:0005622 : intracellular : IEA
  • CC: GO:0030529 : ribonucleoprotein complex : IEA
  • BP: GO:0006412 : translation : IEA
  • MF: GO:0019843 : rRNA binding : IEA
  • CC: GO:0015934 : large ribosomal subunit : IEA
  • MF: GO:0003723 : RNA binding : IEA
  • MF: GO:0003735 : structural constituent of ribosome : IEA
  • CC: GO:0005840 : ribosome : IEA
Domain Structure from CDD
  • Ribosomal_L22: Ribosomal protein L22/L17e. L22 (L17 in eukaryotes) is a core protein of the large ribosomal subunit. It is the only r.... (More)

See domain structure on NCBI Conserved Domain Database
Domain structure from Pfam
See domain structure on Pfam Database
The table at right lists genes that may be "functionally linked to" (i.e., participate in a common biological process, or form a protein complex with) the subject gene of this page, as determined by two sequence-independent methods, including phylogenetic profiling and operon membership (determined by OperonDB). (Info.) These linkages may also be viewed graphically using the program VisANT, by clicking on the headers of the table. Note: VisANT requires Java. To install the latest version of Java, see www.java.com
 OperonDB
gene neighbourhoods
rplP50S ribosomal protein L16
 
 
rpsC30S ribosomal protein S3
 
 
rpsS30S ribosomal protein S19
 
 
rplB50S ribosomal protein L2
 
 
Phenotype Description Expression
Class
Reference(s)
Candidate essential gene Identified as essential gene in one or more studies (see references) Knock out
PMID: 15547264
(candidate essential)