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Gene rpmJ from Helicobacter pylori 26695: 50S ribosomal protein L36
Member of NCBI Protein Clusters PRK00465(See COMBREX Page ) (See NCBI page)
NCBI Entrez GeneID 899024
UniProtKB accession
RefSeq Protein accession NP_208089.1 (PROVISIONAL)
Gene Symbol(s)
  • symbol: rpmJ
  • locus tag: HP1297
Organism Helicobacter pylori 26695 (NCBI TaxID: 85962)
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Contribute a predicted function for this gene (free text, GO terms, or EC number) (info). Be sure to check the list of current predicted functions in the section immediately below beforehand.
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Post a comment about this gene to appear on this page (info).
Source Predicted function(s)
NCBI Protein Cluster Prediction 50S ribosomal protein L36
COMBREX rpmJ 50S ribosomal protein L36 (source organism: Escherichia coli (strain K12).; strain specific ID: ) [More information on this prediction]
Berkeley Phylogenomics Group GO:0005515 protein binding / (References: 19435885)
Functional Status blueblue (function predicted, no experimental evidence)
Source of prediction NCBI Protein Clusters info
BLASTP hits to experimentally validated proteins
green rpmJ from Escherichia coli str. K-12 substr. MG1655
(%_identity=81.58; E_val=3e-10; BitScore=58.5)

other hits with E-value < 1e-05
Share the same Pfam domain composition with the following experimentally validated proteins
green rpmJ from Deinococcus radiodurans R1

to see the rest 2 gene click here
GO terms
  • CC: GO:0030529 : ribonucleoprotein complex : IEA
  • CC: GO:0005622 : intracellular : IEA
  • BP: GO:0006412 : translation : IEA
  • CC: GO:0005840 : ribosome : IEA
  • MF: GO:0003735 : structural constituent of ribosome : IEA
Domain Structure from CDD
  • Ribosomal_L36: Ribosomal protein L36. 50S ribosomal protein L36; Validated

See domain structure on NCBI Conserved Domain Database
Domain structure from Pfam
See domain structure on Pfam Database
The table at right lists genes that may be "functionally linked to" (i.e., participate in a common biological process, or form a protein complex with) the subject gene of this page, as determined by two sequence-independent methods, including phylogenetic profiling and operon membership (determined by OperonDB). (Info.) These linkages may also be viewed graphically using the program VisANT, by clicking on the headers of the table. Note: VisANT requires Java. To install the latest version of Java, see www.java.com
 gene neighbourhoods
phylogenetic profile
rpsM30S ribosomal protein S13
 
 
HP1299methionine aminopeptidase
 
 
infAtranslation initiation factor IF-1
 
 
rpsR30S ribosomal protein S18 
 
rpmH50S ribosomal protein L34 
 
rpmG50S ribosomal protein L33 
 
rpmB50S ribosomal protein L28 
 
rpsF30S ribosomal protein S6 
 
Phenotype Description Expression
Class
Reference(s)
Candidate essential gene Identified as essential gene in one or more studies (see references) Knock out
PMID: 15547264
(candidate essential)