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Gene HP0013 from Helicobacter pylori 26695: hypothetical protein
Member of NCBI Protein Clusters CLSK2517380(See COMBREX Page ) (See NCBI page)
NCBI Entrez GeneID 899092
UniProtKB accession
RefSeq Protein accession NP_206815.1 (PROVISIONAL)
Gene Symbol(s)
  • symbol: HP0013
  • locus tag: HP0013
Organism Helicobacter pylori 26695 (NCBI TaxID: 85962)
Other Cross References:
  • S
    Structure(s) available in PDB:
  • C
    Gene cloned by a participant in the Protein Structure Initiative (PSI): TargetDB. (To obtain a clone, please contact the PSI:Biology-Materials Repository.)
  • U
    Protein purified by a participant in the Protein Structure Initiative (PSI): TargetDB. (If you are interested in collaborating to obtain the protein, please contact the Northeast Structural Genomics consortium).
  • Protein described in EcoCyc:
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Post a comment about this gene to appear on this page (info).
Source Predicted function(s)
NCBI Protein Cluster Prediction tRNA methyltransferase
Berkeley Phylogenomics Group GO:0003921 GMP synthase activity / (References: 19435885)
Berkeley Phylogenomics Group GO:0004055 argininosuccinate synthase activity / (References: 19435885)
Berkeley Phylogenomics Group GO:0005515 protein binding / (References: 19435885)
Berkeley Phylogenomics Group GO:0019899 enzyme binding / (References: 19435885)
Berkeley Phylogenomics Group GO:0003922 GMP synthase (glutamine-hydrolyzing) activity / (References: 19435885)
Functional Status blueblue (function predicted, no experimental evidence)
Source of prediction NCBI Protein Clusters info
BLASTP hits to experimentally validated proteins This gene does not have a BLAST match to any experimentally validated gene with an E value below 1e-5
GO terms
  • MF: GO:0004055 : argininosuccinate synthase activity : IEA
  • BP: GO:0009228 : thiamin biosynthetic process : IEA
  • CC: GO:0005737 : cytoplasm : IEA
  • MF: GO:0005524 : ATP binding : IEA
  • MF: GO:0003723 : RNA binding : IEA
  • BP: GO:0006526 : arginine biosynthetic process : IEA
Domain Structure from CDD
  • TrmU: Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, .... (More)
  • ThiI: ThiI is required for thiazole synthesis in the thiamine biosynthesis pathway. It belongs to the Adenosine Nucleotide Hyd.... (More)

See domain structure on NCBI Conserved Domain Database
Domain structure from Pfam
See domain structure on Pfam Database
The table at right lists genes that may be "functionally linked to" (i.e., participate in a common biological process, or form a protein complex with) the subject gene of this page, as determined by two sequence-independent methods, including phylogenetic profiling and operon membership (determined by OperonDB). (Info.) These linkages may also be viewed graphically using the program VisANT, by clicking on the headers of the table. Note: VisANT requires Java. To install the latest version of Java, see www.java.com
 OperonDB
phylogenetic profile
dnaGDNA primase
 
 
HP0014hypothetical protein
 
 
HP0015hypothetical protein
 
 
HP1245single-stranded DNA-binding protein 
 
aspSaspartyl-tRNA synthetase 
 
rplQ50S ribosomal protein L17 
 
prfApeptide chain release factor 1 
 
HP1497peptidyl-tRNA hydrolase 
 
HP0355GTP-binding protein LepA 
 
HP0286cell division protein (ftsH) 
 
rncribonuclease III 
 
rplS50S ribosomal protein L19 
 
HP1069cell division protein (ftsH) 
 
rplL50S ribosomal protein L7/L12 
 
rpmA50S ribosomal protein L27 
 
HP1450putative inner membrane protein translocase compon 
 
fmtmethionyl-tRNA formyltransferase 
 
frrribosome recycling factor 
 
rpsP30S ribosomal protein S16