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Gene HP0728 from Helicobacter pylori 26695: hypothetical protein
Member of NCBI Protein Clusters CLSK872424(See COMBREX Page ) (See NCBI page)
NCBI Entrez GeneID 899324
UniProtKB accession
RefSeq Protein accession NP_207522.1 (PROVISIONAL)
Gene Symbol(s)
  • symbol: HP0728
  • locus tag: HP0728
Organism Helicobacter pylori 26695 (NCBI TaxID: 85962)
Other Cross References:
  • S
    Structure(s) available in PDB:
  • C
    Gene cloned by a participant in the Protein Structure Initiative (PSI): TargetDB. (To obtain a clone, please contact the PSI:Biology-Materials Repository.)
  • U
    Protein purified by a participant in the Protein Structure Initiative (PSI): TargetDB. (If you are interested in collaborating to obtain the protein, please contact the Northeast Structural Genomics consortium).
  • Protein described in EcoCyc:
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Contribute a predicted function for this gene (free text, GO terms, or EC number) (info). Be sure to check the list of current predicted functions in the section immediately below beforehand.
Nominate this gene for the Gold Standard Gene Database (if you believe it has been experimentally validated) (info).
Post a comment about this gene to appear on this page (info).
Source Predicted function(s)
NCBI Protein Cluster Prediction tRNA(Ile)-lysidine synthase
Prof. Vitkup 2.4.2.8 / Confidence:0.06 (References: 19935659, 16507154)
Berkeley Phylogenomics Group GO:0032267 tRNA(Ile)-lysidine synthase activity / (References: 19435885)
Berkeley Phylogenomics Group GO:0005515 protein binding / (References: 19435885)
Berkeley Phylogenomics Group GO:0016779 nucleotidyltransferase activity / (References: 19435885)
Berkeley Phylogenomics Group GO:0000049 tRNA binding / (References: 19435885)
Functional Status blueblue (function predicted, no experimental evidence)
Source of prediction NCBI Protein Clusters info
BLASTP hits to experimentally validated proteins This gene does not have a BLAST match to any experimentally validated gene with an E value below 1e-5
Share the same Pfam domain composition with the following experimentally validated proteins
green ydaO from Salmonella enterica subsp. enterica serovar Typhimurium str. LT2

to see the rest 2 gene click here
GO terms
  • CC: GO:0005737 : cytoplasm : IEA
  • MF: GO:0000166 : nucleotide binding : IEA
  • MF: GO:0016879 : ligase activity, forming carbon-nitrogen bonds : IEA
  • MF: GO:0005524 : ATP binding : IEA
  • BP: GO:0008033 : tRNA processing : IEA
  • MF: GO:0016874 : ligase activity : IEA
  • BP: GO:0006400 : tRNA modification : IEA
  • BP: GO:0006412 : translation : IEA
Domain Structure from CDD
  • PP-ATPase: N-terminal domain of predicted ATPase of the PP-loop faimly implicated in cell cycle control [Cell division and chromoso.... (More)

See domain structure on NCBI Conserved Domain Database
Domain structure from Pfam
See domain structure on Pfam Database
The table at right lists genes that may be "functionally linked to" (i.e., participate in a common biological process, or form a protein complex with) the subject gene of this page, as determined by two sequence-independent methods, including phylogenetic profiling and operon membership (determined by OperonDB). (Info.) These linkages may also be viewed graphically using the program VisANT, by clicking on the headers of the table. Note: VisANT requires Java. To install the latest version of Java, see www.java.com
 OperonDB
HP0729hypothetical protein
 
HP0726hypothetical protein
 
HP0727transcriptional regulator, putative
 
HP0730hypothetical protein