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Gene HP1496 from Helicobacter pylori 26695: 50S ribosomal protein L25/general stress protein Ctc
Member of NCBI Protein Clusters PRK05618(See COMBREX Page ) (See NCBI page)
NCBI Entrez GeneID 899795
UniProtKB accession
RefSeq Protein accession NP_208287.1 (PROVISIONAL)
Gene Symbol(s)
  • symbol: HP1496
  • locus tag: HP1496
Organism Helicobacter pylori 26695 (NCBI TaxID: 85962)
Other Cross References:
  • S
    Structure(s) available in PDB:
  • C
    Gene cloned by a participant in the Protein Structure Initiative (PSI): TargetDB. (To obtain a clone, please contact the PSI:Biology-Materials Repository.)
  • U
    Protein purified by a participant in the Protein Structure Initiative (PSI): TargetDB. (If you are interested in collaborating to obtain the protein, please contact the Northeast Structural Genomics consortium).
  • Protein described in EcoCyc:
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Contribute a predicted function for this gene (free text, GO terms, or EC number) (info). Be sure to check the list of current predicted functions in the section immediately below beforehand.
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Post a comment about this gene to appear on this page (info).
Source Predicted function(s)
NCBI Protein Cluster Prediction 50S ribosomal protein L25/general stress protein Ctc
Functional Status blueblue (function predicted, no experimental evidence)
Source of prediction NCBI Protein Clusters info
BLASTP hits to experimentally validated proteins This gene does not have a BLAST match to any experimentally validated gene with an E value below 1e-5
Share the same Pfam domain composition with the following experimentally validated proteins
green ctc from Bacillus subtilis subsp. subtilis str. 168

to see the rest 4 genes click here
GO terms
  • CC: GO:0030529 : ribonucleoprotein complex : IEA
  • CC: GO:0005622 : intracellular : IEA
  • MF: GO:0008097 : 5S rRNA binding : IEA
  • BP: GO:0006412 : translation : IEA
  • MF: GO:0019843 : rRNA binding : IEA
  • MF: GO:0003735 : structural constituent of ribosome : IEA
  • MF: GO:0003723 : RNA binding : IEA
  • CC: GO:0005840 : ribosome : IEA
Domain Structure from CDD
  • Ribosomal_L25_TL5_CTC: Ribosomal_L25_TL5_CTC: Ribosomal L25/TL5/CTC N-terminal 5S rRNA binding domain. L25 is a single-domain protein, homologo.... (More)

See domain structure on NCBI Conserved Domain Database
Domain structure from Pfam
See domain structure on Pfam Database
The table at right lists genes that may be "functionally linked to" (i.e., participate in a common biological process, or form a protein complex with) the subject gene of this page, as determined by two sequence-independent methods, including phylogenetic profiling and operon membership (determined by OperonDB). (Info.) These linkages may also be viewed graphically using the program VisANT, by clicking on the headers of the table. Note: VisANT requires Java. To install the latest version of Java, see www.java.com
 OperonDB
gene neighbourhoods
phylogenetic profile
HP1498hypothetical protein
 
  
HP1497peptidyl-tRNA hydrolase
 
 
 
murEUDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diamin
 
  
HP1495transaldolase
 
  
HP0180apolipoprotein N-acyltransferase  
 
rhotranscription termination factor Rho