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Gene HP1152 from Helicobacter pylori 26695: signal recognition particle protein (ffh)
Member of NCBI Protein Clusters CLSK872512(See COMBREX Page ) (See NCBI page)
NCBI Entrez GeneID 899912
UniProtKB accession
RefSeq Protein accession NP_207943.1 (PROVISIONAL)
Gene Symbol(s)
  • symbol: HP1152
  • locus tag: HP1152
Organism Helicobacter pylori 26695 (NCBI TaxID: 85962)
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Contribute a predicted function for this gene (free text, GO terms, or EC number) (info). Be sure to check the list of current predicted functions in the section immediately below beforehand.
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Post a comment about this gene to appear on this page (info).
Source Predicted function(s)
NCBI Protein Cluster Prediction signal recognition particle protein
Berkeley Phylogenomics Group GO:0043021 ribonucleoprotein binding / (References: 19435885)
Berkeley Phylogenomics Group GO:0003924 GTPase activity / (References: 19435885)
Berkeley Phylogenomics Group GO:0005048 signal sequence binding / (References: 19435885)
Berkeley Phylogenomics Group GO:0005515 protein binding / (References: 19435885)
Berkeley Phylogenomics Group GO:0030942 endoplasmic reticulum signal peptide binding / (References: 19435885)
Berkeley Phylogenomics Group GO:0008312 7S RNA binding / (References: 19435885)
Berkeley Phylogenomics Group GO:0019003 GDP binding / (References: 19435885)
Berkeley Phylogenomics Group GO:0005525 GTP binding / (References: 19435885)
Berkeley Phylogenomics Group GO:0008144 drug binding / (References: 19435885)
Berkeley Phylogenomics Group 3.6.5.4: Signal-recognition-particle GTPase. / (References: 19435885)
Functional Status blueblue (function predicted, no experimental evidence)
Source of prediction NCBI Protein Clusters info
BLASTP hits to experimentally validated proteins
green ffh from Bacillus subtilis subsp. subtilis str. 168
(%_identity=41.11; E_val=2e-89; BitScore=325.0)

other hits with E-value < 1e-05
Share the same Pfam domain composition with the following experimentally validated proteins
green ffh from Escherichia coli str. K-12 substr. MG1655

to see the rest 4 genes click here
GO terms
  • CC: GO:0048500 : signal recognition particle : IEA
  • MF: GO:0008312 : 7S RNA binding : IEA
  • BP: GO:0006614 : SRP-dependent cotranslational protein targeting to membrane : IEA
  • MF: GO:0005525 : GTP binding : IEA
  • MF: GO:0005515 : protein binding : IEA
  • CC: GO:0005786 : signal recognition particle, endoplasmic reticulum targeting : IEA
  • MF: GO:0017111 : nucleoside-triphosphatase activity : IEA
  • MF: GO:0003723 : RNA binding : IEA
  • MF: GO:0000166 : nucleotide binding : IEA
  • CC: GO:0030529 : ribonucleoprotein complex : IEA
Domain Structure from CDD
  • SRP_SPB: Signal peptide binding domain.
  • ffh: signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms th.... (More)
  • SRP: The signal recognition particle (SRP) mediates the transport to or across the plasma membrane in bacteria and the endopl.... (More)
  • SRP54_N: SRP54-type protein, helical bundle domain.

See domain structure on NCBI Conserved Domain Database
Domain structure from Pfam
See domain structure on Pfam Database
The table at right lists genes that may be "functionally linked to" (i.e., participate in a common biological process, or form a protein complex with) the subject gene of this page, as determined by two sequence-independent methods, including phylogenetic profiling and operon membership (determined by OperonDB). (Info.) These linkages may also be viewed graphically using the program VisANT, by clicking on the headers of the table. Note: VisANT requires Java. To install the latest version of Java, see www.java.com
 OperonDB
gene neighbourhoods
HP1150hypothetical protein
 
 
rpsP30S ribosomal protein S16
 
 
valSvalyl-tRNA synthetase