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Gene rplC from Helicobacter pylori 26695: 50S ribosomal protein L3
Member of NCBI Protein Clusters PRK00001(See COMBREX Page ) (See NCBI page)
NCBI Entrez GeneID 900242
UniProtKB accession
RefSeq Protein accession NP_208111.1 (PROVISIONAL)
Gene Symbol(s)
  • symbol: rplC
  • locus tag: HP1319
Organism Helicobacter pylori 26695 (NCBI TaxID: 85962)
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Contribute a predicted function for this gene (free text, GO terms, or EC number) (info). Be sure to check the list of current predicted functions in the section immediately below beforehand.
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Source Predicted function(s)
NCBI Protein Cluster Prediction 50S ribosomal protein L3
Berkeley Phylogenomics Group GO:0005515 protein binding / (References: 19435885)
Functional Status blueblue (function predicted, no experimental evidence)
Source of prediction NCBI Protein Clusters info
BLASTP hits to experimentally validated proteins
green rplC from Thermus thermophilus HB8
(%_identity=39.0; E_val=1e-27; BitScore=117.0)

other hits with E-value < 1e-05
Share the same Pfam domain composition with the following experimentally validated proteins
green rplC from Thermus thermophilus HB8

to see the rest 5 genes click here
GO terms
  • CC: GO:0005622 : intracellular : IEA
  • CC: GO:0030529 : ribonucleoprotein complex : IEA
  • CC: GO:0005840 : ribosome : IEA
  • MF: GO:0003735 : structural constituent of ribosome : IEA
  • BP: GO:0006412 : translation : IEA
  • MF: GO:0003723 : RNA binding : IEA
  • MF: GO:0019843 : rRNA binding : IEA
Domain Structure from CDD
  • Ribosomal_L3: Ribosomal protein L3. 60S ribosomal protein L3; Provisional

See domain structure on NCBI Conserved Domain Database
Domain structure from Pfam
See domain structure on Pfam Database
The table at right lists genes that may be "functionally linked to" (i.e., participate in a common biological process, or form a protein complex with) the subject gene of this page, as determined by two sequence-independent methods, including phylogenetic profiling and operon membership (determined by OperonDB). (Info.) These linkages may also be viewed graphically using the program VisANT, by clicking on the headers of the table. Note: VisANT requires Java. To install the latest version of Java, see www.java.com
 gene neighbourhoods
OperonDB
rplD50S ribosomal protein L4
 
 
rplW50S ribosomal protein L23 
 
rpsJ30S ribosomal protein S10