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Gene rplP from Helicobacter pylori 26695: 50S ribosomal protein L16
Member of NCBI Protein Clusters PRK09203(See COMBREX Page ) (See NCBI page)
NCBI Entrez GeneID 900309
UniProtKB accession
RefSeq Protein accession NP_208104.1 (PROVISIONAL)
Gene Symbol(s)
  • symbol: rplP
  • locus tag: HP1312
Organism Helicobacter pylori 26695 (NCBI TaxID: 85962)
Other Cross References:
  • S
    Structure(s) available in PDB:
  • C
    Gene cloned by a participant in the Protein Structure Initiative (PSI): TargetDB. (To obtain a clone, please contact the PSI:Biology-Materials Repository.)
  • U
    Protein purified by a participant in the Protein Structure Initiative (PSI): TargetDB. (If you are interested in collaborating to obtain the protein, please contact the Northeast Structural Genomics consortium).
  • Protein described in EcoCyc:
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Post a comment about this gene to appear on this page (info).
Source Predicted function(s)
NCBI Protein Cluster Prediction 50S ribosomal protein L16
Berkeley Phylogenomics Group GO:0005515 protein binding / (References: 19435885)
Berkeley Phylogenomics Group GO:0003735 structural constituent of ribosome / (References: 19435885)
Functional Status blueblue (function predicted, no experimental evidence)
Source of prediction NCBI Protein Clusters info
BLASTP hits to experimentally validated proteins
green rplP from Escherichia coli str. K-12 substr. MG1655
(%_identity=62.41; E_val=5e-44; BitScore=171.0)

other hits with E-value < 1e-05
Share the same Pfam domain composition with the following experimentally validated proteins
green rplP from Escherichia coli str. K-12 substr. MG1655

to see the rest 6 genes click here
GO terms
  • CC: GO:0030529 : ribonucleoprotein complex : IEA
  • CC: GO:0005622 : intracellular : IEA
  • BP: GO:0006412 : translation : IEA
  • MF: GO:0000049 : tRNA binding : IEA
  • MF: GO:0019843 : rRNA binding : IEA
  • MF: GO:0003723 : RNA binding : IEA
  • CC: GO:0005840 : ribosome : IEA
  • MF: GO:0003735 : structural constituent of ribosome : IEA
Domain Structure from CDD
  • Ribosomal_L16_L10e: Ribosomal_L16_L10e: L16 is an essential protein in the large ribosomal subunit of bacteria, mitochondria, and chloroplas.... (More)

See domain structure on NCBI Conserved Domain Database
Domain structure from Pfam
See domain structure on Pfam Database
The table at right lists genes that may be "functionally linked to" (i.e., participate in a common biological process, or form a protein complex with) the subject gene of this page, as determined by two sequence-independent methods, including phylogenetic profiling and operon membership (determined by OperonDB). (Info.) These linkages may also be viewed graphically using the program VisANT, by clicking on the headers of the table. Note: VisANT requires Java. To install the latest version of Java, see www.java.com
 OperonDB
gene neighbourhoods
rpsC30S ribosomal protein S3
 
 
rplV50S ribosomal protein L22
 
 
rpsQ30S ribosomal protein S17
 
 
rpmC50S ribosomal protein L29