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Gene rplQ from Escherichia coli str. K-12 substr. MG1655: 50S ribosomal subunit protein L17
Member of NCBI Protein Clusters PRK05591(See COMBREX Page ) (See NCBI page)
NCBI Entrez GeneID 947784
UniProtKB accession
RefSeq Protein accession NP_417753.1 (PROVISIONAL)
Gene Symbol(s)
  • symbol: rplQ
  • locus tag: b3294
  • aliases: ECK3281, JW3256
Organism Escherichia coli str. K-12 substr. MG1655 (NCBI TaxID: 511145)
Other Cross References:
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Source Predicted function(s)
NCBI Protein Cluster Prediction 50S ribosomal protein L17
Source References Functional description
GSDB
[PMID: 3298242]
[PMID: 10094780]
[PMID: 12809609]
[PMID: 16272117]
50S ribosomal protein L17 (source organism: Escherichia coli (strain K12).; strain specific ID: K12)
Functional Status greenGreen (experimental evidence, uncurated)
GO terms
  • CC: GO:0030529 : ribonucleoprotein complex : IEA
  • CC: GO:0005622 : intracellular : IEA
  • BP: GO:0006412 : translation : IEA
  • MF: GO:0003735 : structural constituent of ribosome : IEA
  • CC: GO:0005840 : ribosome : IEA
Domain Structure from CDD
  • Ribosomal_L17: Ribosomal protein L17. 60S ribosomal protein L17; Provisional

See domain structure on NCBI Conserved Domain Database
Domain structure from Pfam
See domain structure on Pfam Database
Based on the function of this gene, COMBREX predictions were made to the following related genes (mouse over gene symbol for details) [Download ]
CKO_04707 , NT01EI_3569 , rplQ (105) , SARI_04214 , Tola_0125 , VCD_001793
The table at right lists genes that may be "functionally linked to" (i.e., participate in a common biological process, or form a protein complex with) the subject gene of this page, as determined by two sequence-independent methods, including phylogenetic profiling and operon membership (determined by OperonDB). (Info.) These linkages may also be viewed graphically using the program VisANT, by clicking on the headers of the table. Note: VisANT requires Java. To install the latest version of Java, see www.java.com
 phylogenetic profile
gene neighbourhoods
rpmG50S ribosomal subunit protein L33
 
 
rpoARNA polymerase, alpha subunit 
 
fmt10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N
 
 
rpsP30S ribosomal subunit protein S16
 
 
yidCmembrane protein insertase
 
 
obgEGTPase involved in cell partioning and DNA repair
 
 
frrribosome recycling factor
 
 
acpPacyl carrier protein (ACP)
 
 
rpsF30S ribosomal subunit protein S6
 
 
rpsR30S ribosomal subunit protein S18
 
 
truCtRNA U65 pseudouridine synthase
 
 
tufBprotein chain elongation factor EF-Tu (duplicate o
 
 
rluD23S rRNA pseudouridine synthase; specific to U1911
 
 
arnAfused UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-
 
 
rluApseudouridine synthase for 23S rRNA (position 746)
 
 
rplS50S ribosomal subunit protein L19
 
 
pthpeptidyl-tRNA hydrolase
 
 
rpmA50S ribosomal subunit protein L27
 
 
mnmAtRNA (5-methylaminomethyl-2-thiouridylate)-methylt
 
 
ssbsingle-stranded DNA-binding protein
 
 
rpmI50S ribosomal subunit protein L35
 
 
rplL50S ribosomal subunit protein L7/L12
 
 
prfApeptide chain release factor RF-1
 
 
tsfprotein chain elongation factor EF-Ts
 
 
lepAback-translocating Elongation Factor EF4, GTPase
 
 
rluC23S rRNA pseudouridine synthase; specific to U955,
 
 
aspSaspartyl-tRNA synthetase
 
 
rncRNase III
 
 
rplI50S ribosomal subunit protein L9
 
 
ftsHprotease, ATP-dependent zinc-metallo
 
 
tufAprotein chain elongation factor EF-Tu (duplicate o
 
 
Phenotype Description Expression
Class
Reference(s)
Candidate essential gene Identified as essential gene in one or more studies (see references) Knock out
PMID: 13129938
(not essential)
PMID: 17700540
(candidate essential)
PMID: 20029369
(candidate essential)