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Gene rpmJ from Escherichia coli str. K-12 substr. MG1655: 50S ribosomal subunit protein L36
Member of NCBI Protein Clusters PRK00465(See COMBREX Page ) (See NCBI page)
NCBI Entrez GeneID 947805
UniProtKB accession
RefSeq Protein accession NP_417758.1 (PROVISIONAL)
Gene Symbol(s)
  • symbol: rpmJ
  • locus tag: b3299
  • aliases: ECK3286, JW3261, secX
Organism Escherichia coli str. K-12 substr. MG1655 (NCBI TaxID: 511145)
Other Cross References:
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Source Predicted function(s)
NCBI Protein Cluster Prediction 50S ribosomal protein L36
Source References Functional description
GSDB
[PMID: 3298224]
[PMID: 10094780]
[PMID: 12809609]
[PMID: 16272117]
50S ribosomal protein L36 (source organism: Escherichia coli (strain K12).; strain specific ID: )
Functional Status greenGreen (experimental evidence, uncurated)
GO terms
  • CC: GO:0030529 : ribonucleoprotein complex : IEA
  • CC: GO:0005622 : intracellular : IEA
  • BP: GO:0006412 : translation : IEA
  • MF: GO:0003735 : structural constituent of ribosome : IEA
  • CC: GO:0005840 : ribosome : IEA
Domain Structure from CDD
  • Ribosomal_L36: Ribosomal protein L36. 50S ribosomal protein L36; Validated

See domain structure on NCBI Conserved Domain Database
Domain structure from Pfam
See domain structure on Pfam Database
Based on the function of this gene, COMBREX predictions were made to the following related genes (mouse over gene symbol for details) [Download ]
CJA_0720 , rpmJ (95) , Tola_0120 , VCD_001788
The table at right lists genes that may be "functionally linked to" (i.e., participate in a common biological process, or form a protein complex with) the subject gene of this page, as determined by two sequence-independent methods, including phylogenetic profiling and operon membership (determined by OperonDB). (Info.) These linkages may also be viewed graphically using the program VisANT, by clicking on the headers of the table. Note: VisANT requires Java. To install the latest version of Java, see www.java.com
 gene neighbourhoods
phylogenetic profile
rpsM30S ribosomal subunit protein S13
 
 
rpsR30S ribosomal subunit protein S18 
 
rpmH50S ribosomal subunit protein L34 
 
rpmB50S ribosomal subunit protein L28 
 
rpsF30S ribosomal subunit protein S6 
 
rpmG50S ribosomal subunit protein L33 
 
Phenotype Description Expression
Class
Reference(s)
Ampicillin sensitivity Knockout confers increased sensitivity to ampicillin Knock out
PMID: 20065048
Colistin sensitivity Knockout confers increased sensitivity to colistin Knock out
PMID: 20065048
Erythromycin sensitivity Knockout confers increased sensitivity to erythromycin Knock out
PMID: 20065048
Nitrofurantoin sensitivity Knockout confers increased sensitivity to nitrofurantoin Knock out
PMID: 20065048
Rifampicin sensitivity Knockout confers increased sensitivity to rifampicin Knock out
PMID: 20065048
Spectinomycin sensitivity Knockout confers increased sensitivity to spectinomycin Knock out
PMID: 20065048
Sulfamethoxazole sensitivity Knockout confers increased sensitivity to sulfamethoxazole Knock out
PMID: 20065048
Tetracycline sensitivity Knockout confers increased sensitivity to tetracycline Knock out
PMID: 20065048
Vancomycin sensitivity Knockout confers increased sensitivity to vancomycin Knock out
PMID: 20065048