COMBREX: rpmJ in Deinococcus radiodurans R1

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Gene rpmJ from Deinococcus radiodurans R1: 50S ribosomal protein L36

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Summary

Member of NCBI Protein Clusters	PRK00465(See COMBREX Page ) (See NCBI page)
NCBI Entrez GeneID	1799730
UniProtKB accession	Q9RSK0
RefSeq Protein accession	NP_295847.1 (REVIEWED)
Gene Symbol(s)	symbol: rpmJ locus tag: DR_2124
Organism	Deinococcus radiodurans R1 (NCBI TaxID: 243230)
Other Cross References:	S Structure(s) available in PDB: 1NKW 1NWX 1NWY 1PNU 1PNY 1SM1 1VOU 1VOY 1XBP 2ZJP 2ZJQ 2ZJR 3CF5 3DLL 3PIO 3PIP C Gene cloned by a participant in the Protein Structure Initiative (PSI): TargetDB. (To obtain a clone, please contact the PSI:Biology-Materials Repository.) U Protein purified by a participant in the Protein Structure Initiative (PSI): TargetDB. (If you are interested in collaborating to obtain the protein, please contact the Northeast Structural Genomics consortium). Protein described in EcoCyc:

Actions You Can Take

	Initiate the grant application process for experimentally validating this gene (Important notice about COMBREX grants.)
	Contribute a predicted function for this gene (free text, GO terms, or EC number) (info). Be sure to check the list of current predicted functions in the section immediately below beforehand.
	Nominate this gene for the Gold Standard Gene Database (if you believe it has been experimentally validated) (info).
	Post a comment about this gene to appear on this page (info).

Function Predictions

Source	Predicted function(s)
NCBI Protein Cluster Prediction	50S ribosomal protein L36

Experimental Validation

Source	References	Functional description
GSDB	Under Review	50S ribosomal protein L36 (source organism: Deinococcus radiodurans; strain specific ID: NCBI_TaxID=1299)

Supporting Functional Information

Functional Status	Green (experimental evidence, uncurated)
GO terms	MF: GO:0046872 : metal ion binding : IEA CC: GO:0005622 : intracellular : IEA CC: GO:0030529 : ribonucleoprotein complex : IEA BP: GO:0006412 : translation : IEA MF: GO:0019843 : rRNA binding : IEA MF: GO:0003735 : structural constituent of ribosome : IEA MF: GO:0003723 : RNA binding : IEA CC: GO:0005840 : ribosome : IEA
Domain Structure from CDD	Ribosomal_L36: Ribosomal protein L36. 50S ribosomal protein L36; Validated See domain structure on NCBI Conserved Domain Database
Domain structure from Pfam	Ribosomal_L36 H See domain structure on Pfam Database
Based on the function of this gene, COMBREX predictions were made to the following related genes (mouse over gene symbol for details)	[Download ] rpmJ (8)

Pathway Information

KEGG	dra03010: Ribosome