Combrex Enter Keyword, gene symbol, or identifier (more options; Help )
Enter species name
Gene functional status (select)
Phenotype association (select)[View list of phenotypes]
Check to restrict search to:
Genes in Category A-C and Emerging/Re-Emerging pathogens
Genes in curated Protein Clusters
Genes with predictions submitted to COMBREX
P
Genes with solved structures in PDB
S
Genes with Pfam domains shared with human proteins
H
Genes with products purified by PSI
U
Genes cloned by PSI
C
close options

 

Gene Spea_2956 from Shewanella pealeana ATCC 700345: hypothetical protein

Hide | Top

Summary
Member of NCBI Protein Clusters CLSK903661(See COMBREX Page ) (See NCBI page)
NCBI Entrez GeneID 5663346
UniProtKB accession
RefSeq Protein accession YP_001502808.1 (PROVISIONAL)
Gene Symbol(s)
  • symbol: Spea_2956
  • locus tag: Spea_2956
Organism Shewanella pealeana ATCC 700345 (NCBI TaxID: 398579)

Hide | Top

Actions You Can Take
Initiate the grant application process for experimentally validating this gene (Important notice about COMBREX grants.)
Contribute a predicted function for this gene (free text, GO terms, or EC number) (info). Be sure to check the list of current predicted functions in the section immediately below beforehand.
Nominate this gene for the Gold Standard Gene Database (if you believe it has been experimentally validated) (info).
Post a comment about this gene to appear on this page (info).

Hide | Top

Function Predictions
Source Predicted function(s)
NCBI Protein Cluster Prediction restriction endonuclease PvuRts1I

Hide | Top

Experimental Validation
Source References Functional description
COMBREX Under Review Type IV restriction endonuclease SpeAI, hmC-specific / COMBREX-validated
GSDB
[PMID: 19846593]
SpeAI, Type II restriction enzyme of unknown recognition sequence (source organism: Shewanella pealeana; strain specific ID: )

Hide | Top

Supporting Functional Information
Functional Status greenGreen (experimental evidence, uncurated)
Domain Structure from CDD
  • Restriction_endonuclease_like: N/A. DNA mismatch repair protein; Provisional
  • Restriction_endonuclease_like: Superfamily of nucleases including Short Patch Repair (Vsr) Endonucleases, archaeal Holliday junction resolvases, MutH m.... (More)

See domain structure on NCBI Conserved Domain Database