Gene HP1243 from Helicobacter pylori 26695: outer membrane protein (omp28)
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Member of NCBI Protein Clusters
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CLSK2392999(See COMBREX Page ) (See NCBI page)
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NCBI Entrez GeneID
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898891
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UniProtKB accession
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RefSeq Protein accession
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NP_208035.1 (PROVISIONAL)
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Gene Symbol(s)
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- symbol: HP1243
- locus tag: HP1243
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Organism
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Helicobacter pylori 26695 (NCBI TaxID: 85962)
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Initiate the grant application process for experimentally validating this gene (Important notice about COMBREX grants.)
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Contribute a predicted function for this gene (free text, GO terms, or EC number) (info). Be sure to
check the list of current predicted functions in the section immediately below beforehand.
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Nominate this gene for the Gold Standard Gene Database (if you believe it has been experimentally
validated) (info).
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Post a comment about this gene to appear on this page (info).
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Source
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Predicted function(s)
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NCBI Protein Cluster Prediction
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outer membrane protein BabA
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Functional Status
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blue (function predicted, no experimental evidence)
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Source of prediction
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NCBI Protein Clusters info
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BLASTP hits to experimentally validated proteins
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This gene does not have a BLAST match to any experimentally validated gene with an E value below 1e-5
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Domain Structure from CDD
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- HP_OMP: Helicobacter outer membrane protein. This family seems confined to Helicobacter. It is predicted to be an outer membrane protein based on its pattern of alternating hydrophobic amino acids similar to porins..... (More)
See domain structure on NCBI Conserved Domain Database
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Domain structure from Pfam
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See domain structure on Pfam Database
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The table at right lists genes that may be "functionally linked to" (i.e., participate in a common biological process, or form a protein complex with) the subject gene of this page,
as determined by two sequence-independent methods, including phylogenetic profiling and operon membership (determined by OperonDB).
(Info.)
These linkages may also be viewed graphically using the program VisANT, by clicking on the headers of the table.
Note: VisANT requires Java. To install the latest version of Java, see www.java.com
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| | rpsR | 30S ribosomal protein S18 | | | | HP1245 | single-stranded DNA-binding protein | | | | HP0253 | hypothetical protein | | |
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